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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23911742_23912861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23911742 - 23912861

Intron Length:

1120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

ATAAAGATAAGG

Flanking Amino Acid:

VEFAHKWNKNWTAGANHKQM

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

79.7

33.4

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

77.6

0.62

0.8

69.4

36.9

Minor 5ss

44.9

-0.6

3.2

63.2

43.8

Minor BPS

35.5

-1.2

2.4

41.6

42.2

Associated Gene:

Gene:

SERINC5

Ensembl Gene ID:

ENSAPLG00000005798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048391

23897495 - 23922462

24968

ENSAPLT00000043741

23877952 - 23922462

44511

ENSAPLT00000006027

23889640 - 23922462

32823