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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23918609_23921075_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23918609 - 23921075

Intron Length:

2467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

AGACTCTTACCC

Flanking Amino Acid:

RGIYAAPETEVARCCFCCVP

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

80.3

27.7

Major BPS

69.2

0.48

37.1

Major PPT

84.4

0.77

0.8

80.2

Minor 5ss

39.1

-1.2

2.9

50.9

39.6

Minor BPS

52.6

0.06

1.6

59.76

38.8

Associated Gene:

Gene:

SERINC5

Ensembl Gene ID:

ENSAPLG00000005798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048391

23897495 - 23922462

24968

ENSAPLT00000043741

23877952 - 23922462

44511

ENSAPLT00000006027

23889640 - 23922462

32823