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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23921935_23922228_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23921935 - 23922228

Intron Length:

294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TTTCCTTTAACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTCCTTTAACA

Flanking Amino Acid:

YVMMTVTHWFHYESAQIEKF

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.1

35.7

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

0.76

0.8

80.8

29.7

Minor 5ss

35.2

-1.7

3.2

47.2

42.3

Minor BPS

84.5

1.08

88.93

Associated Gene:

Gene:

SERINC5

Ensembl Gene ID:

ENSAPLG00000005798

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048391

23897495 - 23922462

24968

ENSAPLT00000043741

23877952 - 23922462

44511

ENSAPLT00000006027

23889640 - 23922462

32823