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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23940447_23941227_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23940447 - 23941227

Intron Length:

781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGCAGG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GATACTGGAATT

Flanking Amino Acid:

SCPTVSNPNQSDIDNDLVGD

Intron Amino Acid Position:

701

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

64.8

46.6

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

35.1

-1.7

2.7

40.9

Minor BPS

45.6

-0.2

2.1

63.56

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006449

23931160 - 23970097

38938

ENSAPLT00000035377

23935197 - 23970097

34901

ENSAPLT00000032913

23932358 - 23970097

37740