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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23945726_23948464_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23945726 - 23948464

Intron Length:

2739

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TGATTAATAACT

Flanking Amino Acid:

VPNSHCINTLGSYHCGQCKS

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

0.6

1.2

75.9

36.3

Major PPT

89.6

0.89

0.7

84.2

30.9

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

54.5

0.22

1.9

75.99

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032913

23932358 - 23970097

37740

ENSAPLT00000006449

23931160 - 23970097

38938

ENSAPLT00000035377

23935197 - 23970097

34901