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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_23954429_23959422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23954429 - 23959422

Intron Length:

4994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTCTTTTTCATT

Flanking Amino Acid:

QQIEPASQYNGDFNRQLMSQ

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.8

41.8

Major BPS

100

1.24

0.5

100

Major PPT

83.8

0.76

0.8

77.4

31.5

Minor 5ss

33.5

-1.9

3.4

45.9

43.3

Minor BPS

53.7

0.2

1.7

69.97

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035377

23935197 - 23970097

34901

ENSAPLT00000032913

23932358 - 23970097

37740

ENSAPLT00000006449

23931160 - 23970097

38938