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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24053651_24057378_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24053651 - 24057378

Intron Length:

3728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGTCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAT

U12 Branch Point Sequence:

CTGCCTTGCAGT

Flanking Amino Acid:

LPSEKAIFKTAPAIPTIKAE

Intron Amino Acid Position:

3917

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

82.4

29.9

Major BPS

70.5

0.51

1.1

69.7

35.5

Major PPT

70.9

0.47

0.9

63.9

36.9

Minor 5ss

42.1

-0.9

2.4

52.1

44.5

Minor BPS

42.1

-0.5

2.1

57.43

45.6

Associated Gene:

Gene:

CMYA5

Ensembl Gene ID:

ENSAPLG00000023658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038322

24043464 - 24089365

45902

ENSAPLT00000021664

24043464 - 24089365

45902