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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24058643_24063055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24058643 - 24063055

Intron Length:

4413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCCATTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GTGTGAATAACA

Flanking Amino Acid:

SNQHSLKQVAVPQTPSVIPQ

Intron Amino Acid Position:

3818

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.6

38.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

77.5

0.62

0.9

74.7

34.6

Minor 5ss

36.7

-1.5

3.2

48.7

41.4

Minor BPS

46.2

-0.2

2.2

62.47

43.2

Associated Gene:

Gene:

CMYA5

Ensembl Gene ID:

ENSAPLG00000023658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038322

24043464 - 24089365

45902

ENSAPLT00000021664

24043464 - 24089365

45902