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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24065196_24066878_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24065196 - 24066878

Intron Length:

1683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

AAACTGCTAATA

Flanking Amino Acid:

EELDGFVFLNSSKELNKRLL

Intron Amino Acid Position:

3770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

84.8

0.78

0.6

85.1

22.4

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

41.6

-0.6

2.1

49.82

34.4

Associated Gene:

Gene:

CMYA5

Ensembl Gene ID:

ENSAPLG00000023658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038322

24043464 - 24089365

45902

ENSAPLT00000021664

24043464 - 24089365

45902