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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24184259_24188846_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24184259 - 24188846

Intron Length:

4588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TATGTACCTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCCCTTTTAAAC

Flanking Amino Acid:

GFSSEHHLSKFAEKFQEFKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.8

0.58

0.9

71.4

39.4

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

55.7

0.16

1.4

59.98

39.5

Associated Gene:

Gene:

HOMER1

Ensembl Gene ID:

ENSAPLG00000007877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008185

24155147 - 24240361

85215