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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24188940_24196016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24188940 - 24196016

Intron Length:

7077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTACTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AATTTATTATTT

Flanking Amino Acid:

KMELTSTPSQESAGGDIQSP

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

80.7

33.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

72.2

0.5

1.1

73.1

36.3

Minor 5ss

36.4

-1.5

3.2

50.5

Minor BPS

0.17

1.8

72.42

38.5

Associated Gene:

Gene:

HOMER1

Ensembl Gene ID:

ENSAPLG00000007877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008185

24155147 - 24240361

85215