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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24220374_24233895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24220374 - 24233895

Intron Length:

13522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTATTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

CTTATTTCAACA

Flanking Amino Acid:

QEEAERLHKRVTELECVSSQ

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

38.1

Major BPS

0.82

0.8

24.9

Major PPT

77.6

0.62

0.9

73.5

35.7

Minor 5ss

39.1

-1.2

2.8

40.9

45.4

Minor BPS

57.2

0.22

1.6

67.56

39.2

Associated Gene:

Gene:

HOMER1

Ensembl Gene ID:

ENSAPLG00000007877

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008185

24155147 - 24240361

85215