Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_242549_244202_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

242549 - 244202

Intron Length:

1654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TAGTGAATAACA

Flanking Amino Acid:

KKPIPLVSDLSLVQSRKAGI

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

31.6

Major BPS

82.1

0.8

71.6

36.4

Major PPT

84.5

0.78

0.7

77.6

31.2

Minor 5ss

32.2

-2

3.5

44.1

44.7

Minor BPS

46.5

-0.2

2.2

62.93

42.7

Associated Gene:

Gene:

UNC13B

Ensembl Gene ID:

ENSAPLG00000003655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003753

161360 - 353765

192406

ENSAPLT00000003128

161360 - 370186

208827

ENSAPLT00000003123

161360 - 370186

208827