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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24301396_24319870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24301396 - 24319870

Intron Length:

18475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATTAATTAACA

Flanking Amino Acid:

LQRARRRIQELLEKHKNTES

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

75.6

36.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

1.01

0.5

90.9

21.2

Minor 5ss

34.9

-1.7

3.4

45.9

49.3

Minor BPS

67.1

0.53

1.8

79.48

35.6

Associated Gene:

Gene:

JMY

Ensembl Gene ID:

ENSAPLG00000008348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040757

24255350 - 24320665

65316

ENSAPLT00000008699

24237350 - 24320665

83316