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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24357188_24357803_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24357188 - 24357803

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACTCT

5'SS Class:

strong_major

3'SS Sequence:

AAATTTCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TGAGTTTAAATT

Flanking Amino Acid:

KKNVDFLIAEYFEHVEEAVW

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

74.7

36.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

78.1

0.63

0.9

74.5

40.2

Minor 5ss

45.8

-0.4

65.7

45.4

Minor BPS

48.9

-0

1.7

64.21

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008403

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029974

24351877 - 24368160

16284

ENSAPLT00000008722

24351693 - 24367697

16005