Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24369295_24376235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24369295 - 24376235

Intron Length:

6941

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGGAAC

5'SS Class:

major

3'SS Sequence:

TTTCTTAATTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTTCTTAATT

Flanking Amino Acid:

ELTAGSTWHAAGLTTYFHPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

67.1

38.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

61.4

0.26

1.7

74.8

Minor 5ss

34.8

-1.7

3.2

48.6

41.6

Minor BPS

85.1

1.18

0.9

92.77

28.9

Associated Gene:

Gene:

DMGDH

Ensembl Gene ID:

ENSAPLG00000008567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024172

24368181 - 24414730

46550

ENSAPLT00000008947

24368033 - 24414730

46698