Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24399618_24400487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24399618 - 24400487

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

GTTGATTAAACT

Flanking Amino Acid:

AVTAIRISYTGELGWELYHR

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.3

1.11

0.7

90.5

20.5

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

68.1

0.41

1.1

63.1

42.2

Minor 5ss

34.4

-1.8

3.3

48.7

47.5

Minor BPS

0.11

1.9

73.23

43.7

Associated Gene:

Gene:

DMGDH

Ensembl Gene ID:

ENSAPLG00000008567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024172

24368181 - 24414730

46550