Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24401788_24413603_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24401788 - 24413603

Intron Length:

11816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATGTC

5'SS Class:

major

3'SS Sequence:

GCTATTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TCATTATTATCT

Flanking Amino Acid:

GLEYFVKLNKPADFIGKQTL

Intron Amino Acid Position:

775

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

74.7

33.7

Major BPS

84.7

0.86

74.3

40.7

Major PPT

83.2

0.75

0.9

80.4

37.1

Minor 5ss

42.7

-0.8

3.2

60.6

44.5

Minor BPS

54.5

0.22

1.9

73.48

43.2

Associated Gene:

Gene:

DMGDH

Ensembl Gene ID:

ENSAPLG00000008567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024172

24368181 - 24414730

46550

ENSAPLT00000008947

24368033 - 24414730

46698