Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24485831_24486330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24485831 - 24486330

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAAAG

5'SS Class:

major

3'SS Sequence:

CCTGTTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TATCTGAGAATT

Flanking Amino Acid:

GKWKLLTGYPGCGHWFPPPS

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

71.6

40.1

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

77.8

0.63

0.8

31.9

Minor 5ss

38.4

-1.3

2.9

48.5

47.2

Minor BPS

42.4

-0.4

2.2

64.28

39.9

Associated Gene:

Gene:

ARSB

Ensembl Gene ID:

ENSAPLG00000009330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009736

24420826 - 24486596

65771