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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24578265_24621559_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

24578265 - 24621559

Intron Length:

43295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTCTCTCTGATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

0.72

38.9

Major PPT

78.2

0.64

0.7

73.5

24.8

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

53.8

-0

1.7

62.62

40.1

Associated Gene:

Gene:

LHFPL2

Ensembl Gene ID:

ENSAPLG00000018490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047106

24578212 - 24635437

57226