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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24614393_24645504_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24614393 - 24645504

Intron Length:

31112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAACCGAA

5'SS Class:

major

3'SS Sequence:

CTTTCCTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CCTTTCTTACTT

Flanking Amino Acid:

ATSAAQNAFKGH*

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.39

1.3

59.4

41.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

73.2

0.52

0.8

67.4

33.8

Minor 5ss

40.8

-1

3.3

46.5

48.9

Minor BPS

62.2

0.46

1.6

74.4

43.5

Associated Gene:

Gene:

SCAMP1

Ensembl Gene ID:

ENSAPLG00000030262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006388

24614385 - 24684215

69831