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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24622339_24635180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24622339 - 24635180

Intron Length:

12842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTTCTTTCTGT

Flanking Amino Acid:

NVCGLLQGIAGLFLILGLIL

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

76.4

39.6

Major BPS

84.4

0.85

34.5

Major PPT

87.7

0.85

0.6

81.3

30.7

Minor 5ss

35.2

-1.7

3.5

48.8

47.4

Minor BPS

42.4

-0.5

3.7

79.06

43.7

Associated Gene:

Gene:

LHFPL2

Ensembl Gene ID:

ENSAPLG00000018490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047750

24581811 - 24635437

53627

ENSAPLT00000047106

24578212 - 24635437

57226