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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24647646_24649309_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24647646 - 24649309

Intron Length:

1664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

TTTTTCTTTTCT

Flanking Amino Acid:

QAAGFQRWGNCGWISSLTGL

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

92.6

23.1

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

85.6

0.8

0.7

83.9

24.2

Minor 5ss

41.8

-0.9

2.9

57.3

41.2

Minor BPS

47.9

-0

3.6

87.49

38.1

Associated Gene:

Gene:

SCAMP1

Ensembl Gene ID:

ENSAPLG00000030262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018992

24645307 - 24684215

38909

ENSAPLT00000006388

24614385 - 24684215

69831

ENSAPLT00000021294

24645307 - 24684215

38909