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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24659497_24668010_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24659497 - 24668010

Intron Length:

8514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCATA

5'SS Class:

major

3'SS Sequence:

CTCATTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTCCCTATAATT

Flanking Amino Acid:

EYNPFSDSRTAPPGNVKMPN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

72.1

39.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

77.1

0.61

0.8

76.2

32.2

Minor 5ss

45.2

-0.5

2.9

63.3

Minor BPS

61.4

0.44

1.6

78.08

38.6

Associated Gene:

Gene:

SCAMP1

Ensembl Gene ID:

ENSAPLG00000030262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021294

24645307 - 24684215

38909

ENSAPLT00000006388

24614385 - 24684215

69831