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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_24822453_24823342_F


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
24822453 - 24823342

Intron Length:
890

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTATC

5'SS Class:
major

3'SS Sequence:
TTTCTAATTCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
TTTTAGTTAAAT

Flanking Amino Acid:
QDVFLLDLDDFHPVTTPVAV

Intron Amino Acid Position:
963

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.1
78.6
35.6

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
79.1
0.66
0.8
71.5
38.4

Minor 5ss
43.2
-0.7
2.9
64.8
39.3

Minor BPS
59.5
0.38
2.3
86.49
39

Associated Gene:

Gene:
AP3B1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

24718285 - 24848158
129874

24718285 - 24848158
129874