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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25044023_25045409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25044023 - 25045409

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTAATTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATT

Flanking Amino Acid:

IAHADLTQLLENEKELEEAE

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

82.6

29.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.9

0.83

0.8

78.9

38.5

Minor 5ss

41.2

-1

2.8

Minor BPS

78.1

0.96

86.75

33.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030113

25010843 - 25045662

34820