Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25188504_25194000_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25188504 - 25194000

Intron Length:

5497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTACTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TGTTTTTCAAAT

Flanking Amino Acid:

PMRLTQDPIQVLLIFAKEDN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

79.6

0.67

0.9

77.2

36.7

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

60.2

0.4

1.6

77.94

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036060

25151137 - 25244913

93777

ENSAPLT00000018708

25151137 - 25244913

93777

ENSAPLT00000007678

25151137 - 25244913

93777