Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25274210_25274455_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25274210 - 25274455

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTAGTTGT

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

TATTACTTAGAA

Flanking Amino Acid:

LRLDRKKESSVCPALSKEER

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

72.6

39.2

Major BPS

74.2

0.6

0.9

75.7

Major PPT

90.4

0.91

0.6

89.7

18.7

Minor 5ss

38.4

-1.3

2.8

48.1

41.9

Minor BPS

0.22

1.9

71.56

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030695

25256993 - 25293719

36727

ENSAPLT00000001905

25256993 - 25293719

36727