Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25328375_25330378_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25328375 - 25330378

Intron Length:

2004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAT

5'SS Class:

strong_major

3'SS Sequence:

TGAACCCCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

AATTATTGAACC

Flanking Amino Acid:

IDCQGGDFLKVFDGWILKGE

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

87.7

27.9

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

63.2

0.3

0.9

55.1

36.2

Minor 5ss

33.9

-1.8

3.3

47.8

47.9

Minor BPS

58.3

0.24

1.6

68.31

36.3

Associated Gene:

Gene:

CRHBP

Ensembl Gene ID:

ENSAPLG00000002564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002589

25322897 - 25332352

9456