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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25403280_25405210_F

Intron Information:

Intron Rank:

125447

Intron Class:

major

Intron Phase:

Intron Coordinates:

25403280 - 25405210

Intron Length:

1931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GTCTATTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.9

0.7

88.2

29.1

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

58.3

0.34

1.5

72.22

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026618

25396951 - 25407278

10328