Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25430438_25431247_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25430438 - 25431247

Intron Length:

810

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTACCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACCC

Flanking Amino Acid:

ILETTATAQQESEHLKLVEK

Intron Amino Acid Position:

1414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

86.5

0.82

0.8

81.3

35.4

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

0.64

1.5

81.25

33.5

Associated Gene:

Gene:

IQGAP2

Ensembl Gene ID:

ENSAPLG00000002992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028358

25425763 - 25556835

131073

ENSAPLT00000019323

25425763 - 25556835

131073

ENSAPLT00000003170

25425763 - 25556835

131073

ENSAPLT00000034790

25425763 - 25556835

131073

ENSAPLT00000031192

25425763 - 25556835

131073