Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25472747_25473289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25472747 - 25473289

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGATGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTGATGA

Flanking Amino Acid:

LCDSKAQKMQIAGGPIMLDK

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.5

28.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

69.3

0.43

65.9

39.7

Minor 5ss

32.1

-2

3.1

40.5

45.7

Minor BPS

52.1

0.06

71.6

40.7

Associated Gene:

Gene:

IQGAP2

Ensembl Gene ID:

ENSAPLG00000002992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031192

25425763 - 25556835

131073

ENSAPLT00000003170

25425763 - 25556835

131073