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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25588886_25589686_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25588886 - 25589686

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGACT

5'SS Class:

strong_major

3'SS Sequence:

GACTCTTGCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TTTTGTCTGACT

Flanking Amino Acid:

MDRIGRLTMLGGSMVLSGIS

Intron Amino Acid Position:

614

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.8

36.4

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

0.27

56.8

38.5

Minor 5ss

-1

3.1

58.1

46.3

Minor BPS

56.2

0.28

2.1

83.72

37.5

Associated Gene:

Gene:

SV2C

Ensembl Gene ID:

ENSAPLG00000004492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004610

25578721 - 25685760

107040