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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25591646_25594863_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25591646 - 25594863

Intron Length:

3218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTAGAGA

5'SS Class:

major

3'SS Sequence:

TTGTATTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTGTATTTTACA

Flanking Amino Acid:

IHSNGEYINDRFIMMKFKSV

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.1

0.24

1.2

56.8

41.7

Major BPS

68.1

0.45

58.1

38.5

Major PPT

85.7

0.8

80.1

37.1

Minor 5ss

33.4

-1.9

40.7

45.2

Minor BPS

58.1

0.25

1.8

71.98

Associated Gene:

Gene:

SV2C

Ensembl Gene ID:

ENSAPLG00000004492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004610

25578721 - 25685760

107040