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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25597607_25602814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25597607 - 25602814

Intron Length:

5208

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTTTTATTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATTT

Flanking Amino Acid:

ARGQPEKVFTVNRIKTPKQI

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.4

0.86

0.7

82.1

34.6

Minor 5ss

38.4

-1.3

41.2

Minor BPS

63.7

0.51

1.5

78.58

38.8

Associated Gene:

Gene:

SV2C

Ensembl Gene ID:

ENSAPLG00000004492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004610

25578721 - 25685760

107040