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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25603253_25632637_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25603253 - 25632637

Intron Length:

29385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTCATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

ATTTCTTGAATT

Flanking Amino Acid:

AMAWAIIPHYGWSFSMGSAY

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

74.6

0.61

65.6

41.4

Major PPT

83.2

0.75

0.7

79.6

25.9

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

74.4

0.84

1.3

87.23

31.8

Associated Gene:

Gene:

SV2C

Ensembl Gene ID:

ENSAPLG00000004492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004610

25578721 - 25685760

107040