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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25640414_25662934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25640414 - 25662934

Intron Length:

22521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTTGTGTGTATT

Flanking Amino Acid:

CIPNSGSGWLGSIVYLGMMV

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.5

28.7

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

73.5

0.53

66.4

Minor 5ss

26.7

-2.7

27.8

37.9

Minor BPS

42.6

-0.5

2.4

67.51

43.7

Associated Gene:

Gene:

SV2C

Ensembl Gene ID:

ENSAPLG00000004492

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004610

25578721 - 25685760

107040