Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25881378_25883047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25881378 - 25883047

Intron Length:

1670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTT

5'SS Class:

strong_major

3'SS Sequence:

CCCTAATTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TCTTCTTTGACA

Flanking Amino Acid:

LKLFTSEKDQEGNTALHLAA

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.3

40.4

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

63.3

0.3

1.1

59.6

39.6

Minor 5ss

36.8

-1.5

3.5

56.4

47.8

Minor BPS

79.5

0.92

81.99

33.2

Associated Gene:

Gene:

ANKDD1B

Ensembl Gene ID:

ENSAPLG00000004990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040923

25867357 - 25889323

21967

ENSAPLT00000017320

25865375 - 25893305

27931

ENSAPLT00000005154

25867357 - 25893305

25949