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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25956878_25979558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25956878 - 25979558

Intron Length:

22681

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TAGTTTTTATGT

Flanking Amino Acid:

QWVDAIEQHKTESGYGSESS

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.8

0.83

0.8

84.8

35.4

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

49.7

0.06

1.9

67.86

43.6

Associated Gene:

Gene:

CERT1

Ensembl Gene ID:

ENSAPLG00000005669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044416

25934803 - 26007017

72215

ENSAPLT00000025651

25934803 - 26005442

70640

ENSAPLT00000005900

25931761 - 26007017

75257