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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25981694_25988021_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25981694 - 25988021

Intron Length:

6328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TATCAGTGAATG

Flanking Amino Acid:

LHNSNSSKEKLFPHVTPKGI

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

81.7

Major BPS

73.8

0.59

0.9

26.8

Major PPT

82.9

0.74

0.8

81.2

36.5

Minor 5ss

39.7

-1.2

3.4

57.1

40.8

Minor BPS

43.2

-0.6

2.2

52.29

41.9

Associated Gene:

Gene:

CERT1

Ensembl Gene ID:

ENSAPLG00000005669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044416

25934803 - 26007017

72215

ENSAPLT00000025651

25934803 - 26005442

70640

ENSAPLT00000005900

25931761 - 26007017

75257