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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25988180_25993152_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25988180 - 25993152

Intron Length:

4973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TGTAATTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

GATCATGTAATT

Flanking Amino Acid:

EESWQKRLDKETEKRRRAEE

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

79.8

0.67

0.9

73.3

41.5

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

-0.2

2.1

64.34

Associated Gene:

Gene:

CERT1

Ensembl Gene ID:

ENSAPLG00000005669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044416

25934803 - 26007017

72215

ENSAPLT00000025651

25934803 - 26005442

70640

ENSAPLT00000005900

25931761 - 26007017

75257