Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25995718_25996280_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25995718 - 25996280

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCTGGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTCTGATTACTT

Flanking Amino Acid:

AVGTHRFVQKPYSRSSSMSS

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

80.1

28.2

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

68.5

0.42

65.7

Minor 5ss

-1.2

3.2

55.7

48.5

Minor BPS

-0

2.2

72.41

Associated Gene:

Gene:

CERT1

Ensembl Gene ID:

ENSAPLG00000005669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025651

25934803 - 26005442

70640

ENSAPLT00000005900

25931761 - 26007017

75257