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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_25996359_26000405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25996359 - 26000405

Intron Length:

4047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTAT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTCTTTAAAG

Flanking Amino Acid:

SDDVHRFSAQVEEMVQNHIT

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

68.7

38.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

84.5

0.78

0.9

86.4

25.2

Minor 5ss

37.4

-1.4

3.5

55.6

48.6

Minor BPS

78.4

0.75

1.3

80.63

34.8

Associated Gene:

Gene:

CERT1

Ensembl Gene ID:

ENSAPLG00000005669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025651

25934803 - 26005442

70640

ENSAPLT00000005900

25931761 - 26007017

75257