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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26001157_26002046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26001157 - 26002046

Intron Length:

890

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTGTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TGCTTGTTTACT

Flanking Amino Acid:

WNVDVRNDWETTIENFHVVE

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

83.5

27.6

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

80.4

0.68

0.8

76.4

32.2

Minor 5ss

36.9

-1.5

3.1

49.9

40.5

Minor BPS

48.9

-0

2.3

72.02

44.8

Associated Gene:

Gene:

CERT1

Ensembl Gene ID:

ENSAPLG00000005669

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005900

25931761 - 26007017

75257

ENSAPLT00000044416

25934803 - 26007017

72215

ENSAPLT00000025651

25934803 - 26005442

70640