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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26028794_26029389_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26028794 - 26029389

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTGCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTGTATTATTT

Flanking Amino Acid:

LPYRNYNYSLVMGACCENVI

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

70.8

0.47

1.2

42.4

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

51.9

0.14

1.9

76.22

Associated Gene:

Gene:

HMGCR

Ensembl Gene ID:

ENSAPLG00000006209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006524

26022786 - 26039728

16943