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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26030291_26030410_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26030291 - 26030410

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTATACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCATTTTAATT

Flanking Amino Acid:

EAASVPRDDNAEVIKPVLAE

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

82.5

30.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.7

0.71

0.9

76.8

36.1

Minor 5ss

46.3

-0.4

2.8

64.2

42.3

Minor BPS

69.3

0.68

1.2

79.53

37.3

Associated Gene:

Gene:

HMGCR

Ensembl Gene ID:

ENSAPLG00000006209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006524

26022786 - 26039728

16943