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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26030656_26031915_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26030656 - 26031915

Intron Length:

1260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TAATTCTTGATT

Flanking Amino Acid:

NVSLWQFYLSRMASMDIEQV

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

76.2

33.5

Major BPS

90.7

1.01

0.7

19.9

Major PPT

81.3

0.71

0.8

76.3

32.4

Minor 5ss

33.5

-1.9

3.2

44.3

43.6

Minor BPS

71.7

0.77

1.1

80.05

35.8

Associated Gene:

Gene:

HMGCR

Ensembl Gene ID:

ENSAPLG00000006209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006524

26022786 - 26039728

16943