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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26032068_26032480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26032068 - 26032480

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTTGTGGC

5'SS Class:

major

3'SS Sequence:

GTTTTTAATACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATA

Flanking Amino Acid:

PVTQRVKMIMSLGLVLVHAH

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

57.1

40.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.5

0.66

74.1

39.5

Minor 5ss

35.6

-1.6

41.4

39.5

Minor BPS

75.5

0.8

1.1

78.11

Associated Gene:

Gene:

HMGCR

Ensembl Gene ID:

ENSAPLG00000006209

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006524

26022786 - 26039728

16943