Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26064282_26067621_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26064282 - 26067621

Intron Length:

3340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATATTCC

5'SS Class:

major

3'SS Sequence:

CTTGCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAG

U12 Branch Point Sequence:

AATCTCAGAAAA

Flanking Amino Acid:

QDAVKEGHYEVAALLLWYGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

70.9

33.7

Major BPS

62.2

0.3

1.5

71.4

36.6

Major PPT

80.6

0.69

0.8

73.1

37.3

Minor 5ss

46.9

-0.3

2.5

62.3

42.5

Minor BPS

45.2

-0.3

1.7

56.13

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017698

26064003 - 26072217

8215