Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_26215715_26216912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26215715 - 26216912

Intron Length:

1198

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTGCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATGT

Flanking Amino Acid:

RYPLSTFMCTACKQYFEKYP

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.9

0.99

0.9

77.8

38.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

74.4

0.55

73.1

41.8

Minor 5ss

36.2

-1.6

4.1

56.7

47.6

Minor BPS

66.5

0.6

1.9

87.15

38.9

Associated Gene:

Gene:

FAM169A

Ensembl Gene ID:

ENSAPLG00000006999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007259

26201154 - 26237765

36612